Atelier «Les mathématiques de l’évolution des séquences : modèles biologiques et applications»23 au 27 septembre 2013Programme |
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Le lundi 23 septembre 2013 |
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09:00 - 09:30
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Inscription (salle 5345) et café-croissants (salle 6245)
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Salle(s) de réunion : 6214 |
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09:15 - 09:30
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Mots de bienvenue
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09:30 - 10:30
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Andrew Roger
(Dalhousie University) An energy model for protein evolution with independence amongst sites |
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10:30 - 11:00
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Pause-café
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Salle(s) 6245
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11:00 - 12:00
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Claudia Kleinman
(McGill University) Modelling structural constraints on protein evolution: current progress and open challenges | Résumé |
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12:00 - 14:00
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Pause-déjeuner
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14:00 - 15:00
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Simon Joly
(Jardin Botanique de Montréal) Model-based approaches for studying hybridization |
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15:00 - 15:30
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Yifei Huang
(McMaster University) Phylogenetic gaussian process model for the inference of functional protein regions | Résumé |
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15:30 - 16:00
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Pause-café
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Salle(s) 6245
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16:00 - 17:00
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Louis Bernatchez
(Université Laval) Next-generation population genomics, non-model species, and needs for analytical development: an empiricist perspective | Résumé |
Le mardi 24 septembre 2013 |
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08:30 - 09:00
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Café croissants
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Salle(s) 6245
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Salle(s) de réunion : 6214 |
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09:00 - 10:00
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Edward Susko
(Dalhousie University) Tests for two trees using likelihood methods | Résumé |
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10:00 - 10:30
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Pause-café
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Salle(s) 6245
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10:30 - 11:30
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Richard Goldstein
(MRC National Inst. for Medical Research) Decoding the evolutionary record: What advanced models of sequence change reveal to us about proteins | Résumé |
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11:30 - 12:00
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Communications brèves
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12:00 - 14:00
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Pause-déjeuner
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14:00 - 15:00
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Nicolas Rodrigue
(University of Ottawa) Evaluating deviations from the mutation-selection balance in protein-coding gene evolution |
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15:00 - 15:30
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Pause-café
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Salle(s) 6245
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15:30 - 16:30
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Nicolas Lartillot
(UMR CNRS 5558, Université Lyon 1) Reconstrucing the evolution of the population-genetic environment and of life-history traits along phylogenies | Résumé |
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16:30 - 17:30
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Mathieu Blanchette
(McGill University) Ancestral genome reconstruction and its uses toward annotating the human genome | Résumé |
Le mercredi 25 septembre 2013 |
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08:30 - 09:00
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Café croissants
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Salle(s) 6245
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Salle(s) de réunion : 6214 |
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09:00 - 10:00
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Cédric Chauve
(Simon Fraser University) Retrospective and perspectives on reconstructing ancestral genomes organization in a model-free framework | Résumé |
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10:00 - 10:30
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Pause
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Salle(s) 6245
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10:30 - 11:30
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Hughes Roest Crollius
(École Normale Supérieure ) Out of the mists of times: reconstructing ancestral genomes and their use in genomics | Résumé |
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11:30 - 12:00
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Manuel Lafond
(Université de Montréal) Gene tree correction guided by orthology |
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12:00
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Après-midi libre
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Le jeudi 26 septembre 2013 |
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08:30 - 09:00
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Café croissants
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Salle(s) 6245
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Salle(s) de réunion : 6214 |
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09:00 - 10:00
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Guillaume Bourque
(McGill University) The role of transposable elements in genome evolution |
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10:00 - 10:30
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Pause-café
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Salle(s) 6245
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10:30 - 11:30
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Christian Landry
(Université Laval) The use molecular evolution to identify functional and non functional elements in biological networks |
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11:30 - 12:00
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Jackie Vogel
(McGill University) Quantitative real-space interrogation of protein structure-function relationships in living cells |
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12:00 - 14:00
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Pause-déjeuner
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14:00 - 15:00
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Hervé Philippe
(Université de Montréal) Phylogenomics: are models of sequence evolution key to improve accuracy? |
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15:00 - 15:30
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Abdoulaye Baniré Diallo
(UQAM) A probabilistic approach for gene tree reconstruction including duplication, loss and horizontal gene transfer |
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15:30 - 16:00
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Pause-café
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Salle(s) 6245
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16:00 - 17:00
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Glenn Hickey
(UC Santa Cruz) A probabilistic model for sequence alignment with context-sensitive indels | Résumé |
Le vendredi 27 septembre 2013 |
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08:30 - 09:00
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Café croissants
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Salle(s) 6245
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Salle(s) de réunion : 6214 |
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09:00 - 10:00
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Tony Capra
(Vanderbilt University) Integrating evolutionary and functional genomics to find human-specific enhancers of gene expression | Résumé |
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10:00 - 10:30
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Pause-café
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Salle(s) 6245
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10:30 - 11:30
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Jérôme Waldispühl
(McGill University) Exploring the RNA mutational landscape | Résumé |
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11:30
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Fin de l'atelier
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Mise à jour: Le mardi 10 septembre 2013 10:10