Atelier «Méthodes statistiques computationnelles en génomique et en biologie systémique»18 au 22 avril 2011Programme |
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Le lundi 18 avril 2011 |
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09:00 - 10:00
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Inscription et café croissants
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Salle(s) M-415, Pavillon Roger-Gaudry
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Session - POPULATION GENETICS AND GENETIC EPI: PART I
Salle(s) de réunion : M-415, Pavillon Roger-Gaudry |
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10:00 - 10:15
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Allocutions de bienvenue
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10:15 - 11:15
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Matthew Stephens
(University of Chicago) A unified framework for testing multiple phenotypes for association with genetic variants | Résumé |
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11:15 - 12:00
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Vincent Plagnol
(University College London) Application of exome sequencing to map rare variants associated with celiac disease in multiplex families | Résumé |
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12:00 - 13:30
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Pause-déjeuner
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13:30 - 14:30
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Peter Donnelly
(University of Oxford) Evolution and recombination hotspots | Résumé |
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14:30 - 15:00
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Pause-café
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15:00 - 15:45
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Mark Beaumont
(University of Bristol) Likelihood-free approaches for Bayesian hierarchical models: applications in population genetics | Résumé |
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15:45 - 16:45
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David Balding
(University College London) Moderated Discussion |
Le mardi 19 avril 2011 |
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08:30 - 09:00
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Café croissants
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Session - POPULATION GENETICS AND GENETIC EPI: PART II
Salle(s) de réunion : M-415, Pavillon Roger-Gaudry |
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09:00 - 10:00
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Shelley B. Bull
(University of Toronto) On the utility of some bootstrap methods in genome-wide studies | Résumé |
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10:00 - 10:30
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Pause-café
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10:30 - 11:15
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Kenneth Rice
(University of Washington) Why intuition fails in GWAS | Résumé |
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11:15 - 12:00
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Mary Sara McPeek
(University of Chicago) X-chromosome association analysis in case-control samples with related individuals | Résumé |
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12:00 - 13:30
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Pause-déjeuner
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13:30 - 14:30
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Elizabeth A. Thompson
(University of Washington) Conditional independence structures in the analysis of genetic data in pedigrees and populations | Résumé |
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14:30 - 15:00
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Pause-café
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15:00 - 15:45
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Brad McNeney
(Simon Fraser University) Sources of bias for estimators of gene-by-environment interaction from case-parent trio data | Résumé |
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15:45 - 16:45
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Ellen Wijsman
(University of Washington ) Moderated Discussion |
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17:00 - 19:00
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Session d'affiches & Vin et fromages
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Salle(s) Hall d’honneur, Pav. Roger-Gaudry
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Le mercredi 20 avril 2011 |
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08:30 - 09:00
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Café croissants
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Session - BAYESIAN METHODS IN GENOMICS
Salle(s) de réunion : M-415, Pavillon Roger-Gaudry |
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09:00 - 10:00
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Sylvia Richardson
(Imperial College London) Sparse bayesian regression in genomics | Résumé |
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10:00 - 10:30
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Pause-café
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10:30 - 11:15
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Jon Wakefield
(University of Washington) A hierarchical approach to modeling allele-specific gene expression | Résumé |
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11:15 - 12:00
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Mayetri Gupta
(Boston University) Bayesian methods for prediction of nucleosome positioning in genomic DNA | Résumé |
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12:00 - 13:30
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Pause-déjeuner
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13:30 - 14:30
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Christopher C. Holmes
(University of Oxford) Bayesian hierarchical models for detecting structural aberrations in heterogeneous cancer samples using SNP genotyping data | Résumé |
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14:30 - 15:00
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Pause-café
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15:00 - 15:45
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Donatello Telesca
(UCLA School of Public Health) Modeling Pk/PGx data | Résumé |
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15:45 - 16:45
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David A. Stephens
(McGill University) Moderated Discussion |
Le jeudi 21 avril 2011 |
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08:30 - 09:00
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Café croissants
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Session - EXPRESSION, GENOMIC ARRAYS AND METWORKS
Salle(s) de réunion : M-415, Pavillon Roger-Gaudry |
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09:00 - 10:00
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Christina Kendziorski
(University of Wisconsin Madison) Gene expression as a response and a predictor: two case studies of complex disease genomics | Résumé |
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10:00 - 10:30
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Pause-café
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10:30 - 11:30
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Michael A. Newton
(University of Wisconsin-Madison) Connecting experimental and functional genomic data | Résumé |
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11:30 - 12:30
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Steve Horvath
(UCLA School of Public Health) Is my network module preserved and reproducible? | Résumé |
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12:30 - 14:00
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Pause-déjeuner
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14:00 - 15:00
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Ingo Ruczinski
(Johns Hoplins Bloomberg School of Public Health) Assessing variants in the human genome | Résumé |
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15:00 - 15:30
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Pause-café
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15:30 - 16:30
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Sandrine Dudoit
(UC Berkeley) Moderated Discussion |
Le vendredi 22 avril 2011 |
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08:30 - 09:00
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Café croissants
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Session - COMPUTATIONNAL BIOLOGY AND NEW TECHNOLOGIES
Salle(s) de réunion : M-415, Pavillon Roger-Gaudry |
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09:00 - 09:45
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Laurent Excoffier
(University of Bern) Detecting local adaptation from genome scans in populations with complex histories | Résumé |
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09:45 - 10:30
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Kun Liang
(University of Wisconsin-Madison) Statistical challenges of ChIP-seq analysis | Résumé |
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10:30 - 11:00
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Pause-café
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11:00 - 11:45
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Jennifer Bryan
(University of British Columbia) Identifying gene-gene and gene-compound interactions though high-throughput phenotypic studies | Résumé |
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11:45 - 12:30
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Mark R. Segal
(University of California, San Francisco) Querying genomic databases: refining the connectivity map | Résumé |
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12:30 - 12:35
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Conclusion
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Mise à jour: Le mercredi 20 avril 2011 11:27